dbCAN Logo

Cluster: HRGMv2_0541_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0541_7 HRGMv2_0541_7_23 19828 22029 - GH36
NULL(UNKNOWN) HRGMv2_0541_7 HRGMv2_0541_7_24 22233 22460 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0541_7 HRGMv2_0541_7_25 23641 24264 + NTP_transf_3
TC HRGMv2_0541_7 HRGMv2_0541_7_26 24295 25587 + 2.A.1.8.15
TC HRGMv2_0541_7 HRGMv2_0541_7_27 25608 29300 + 5.A.3.1.1
TC HRGMv2_0541_7 HRGMv2_0541_7_28 29302 30813 + 5.A.3.1.1
pfam HRGMv2_0541_7 HRGMv2_0541_7_29 30830 31333 + Nitrate_red_del
TC HRGMv2_0541_7 HRGMv2_0541_7_30 31346 32014 + 5.A.3.1.2
TC HRGMv2_0541_7 HRGMv2_0541_7_31 32138 34078 + 1.B.14.4.3
pfam HRGMv2_0541_7 HRGMv2_0541_7_32 34082 34603 + NTPase_1
pfam HRGMv2_0541_7 HRGMv2_0541_7_33 34759 35679 - EamA | EamA
TC HRGMv2_0541_7 HRGMv2_0541_7_34 35725 37023 - 2.A.55.3.3
Gene ID: HRGMv2_0541_7_23
Type: CAZyme
Location: 19828 - 22029 (-)
Gene ID: HRGMv2_0541_7_24
Type:
Location: 22233 - 22460 (-)
Gene ID: HRGMv2_0541_7_25
Type: pfam
Location: 23641 - 24264 (+)
Gene ID: HRGMv2_0541_7_26
Type: TC
Location: 24295 - 25587 (+)
Gene ID: HRGMv2_0541_7_27
Type: TC
Location: 25608 - 29300 (+)
Gene ID: HRGMv2_0541_7_28
Type: TC
Location: 29302 - 30813 (+)
Gene ID: HRGMv2_0541_7_29
Type: pfam
Location: 30830 - 31333 (+)
Gene ID: HRGMv2_0541_7_30
Type: TC
Location: 31346 - 32014 (+)
Gene ID: HRGMv2_0541_7_31
Type: TC
Location: 32138 - 34078 (+)
Gene ID: HRGMv2_0541_7_32
Type: pfam
Location: 34082 - 34603 (+)
Gene ID: HRGMv2_0541_7_33
Type: pfam
Location: 34759 - 35679 (-)
Gene ID: HRGMv2_0541_7_34
Type: TC
Location: 35725 - 37023 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List