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Cluster: HRGMv2_0541_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0541_21 HRGMv2_0541_21_13 14977 15600 - 2.A.115.2.14
TC HRGMv2_0541_21 HRGMv2_0541_21_14 15681 17045 - 2.A.66.1.32
pfam HRGMv2_0541_21 HRGMv2_0541_21_15 17111 19108 - FBPase_2
pfam HRGMv2_0541_21 HRGMv2_0541_21_16 19180 20325 - Glyco_transf_4 | Glyco_trans_4_4
CAZyme HRGMv2_0541_21 HRGMv2_0541_21_17 20322 21515 - GT2
pfam HRGMv2_0541_21 HRGMv2_0541_21_18 21512 22678 - Orn_DAP_Arg_deC | Orn_Arg_deC_N
pfam HRGMv2_0541_21 HRGMv2_0541_21_19 22757 24082 - AA_kinase | ACT_9
TC HRGMv2_0541_21 HRGMv2_0541_21_20 24107 24925 - 3.A.1.140.1
Gene ID: HRGMv2_0541_21_13
Type: TC
Location: 14977 - 15600 (-)
Gene ID: HRGMv2_0541_21_14
Type: TC
Location: 15681 - 17045 (-)
Gene ID: HRGMv2_0541_21_15
Type: pfam
Location: 17111 - 19108 (-)
Gene ID: HRGMv2_0541_21_16
Type: pfam
Location: 19180 - 20325 (-)
Gene ID: HRGMv2_0541_21_17
Type: CAZyme
Location: 20322 - 21515 (-)
Gene ID: HRGMv2_0541_21_18
Type: pfam
Location: 21512 - 22678 (-)
Gene ID: HRGMv2_0541_21_19
Type: pfam
Location: 22757 - 24082 (-)
Gene ID: HRGMv2_0541_21_20
Type: TC
Location: 24107 - 24925 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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