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Cluster: HRGMv2_0541_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0541_13 HRGMv2_0541_13_14 17964 19685 - 8.A.46.1.1
TC HRGMv2_0541_13 HRGMv2_0541_13_15 19768 22791 - 1.B.14.6.1
TF HRGMv2_0541_13 HRGMv2_0541_13_16 23156 24181 + LacI
TC HRGMv2_0541_13 HRGMv2_0541_13_17 24633 25946 + 2.A.2.6.2
CAZyme HRGMv2_0541_13 HRGMv2_0541_13_18 26055 28817 + CBM20 | GH77
CAZyme HRGMv2_0541_13 HRGMv2_0541_13_19 28901 31039 + GH97
CAZyme HRGMv2_0541_13 HRGMv2_0541_13_20 31202 33106 + GH13_14
CAZyme HRGMv2_0541_13 HRGMv2_0541_13_21 33322 35193 + GH13_46
Gene ID: HRGMv2_0541_13_14
Type: TC
Location: 17964 - 19685 (-)
Gene ID: HRGMv2_0541_13_15
Type: TC
Location: 19768 - 22791 (-)
Gene ID: HRGMv2_0541_13_16
Type: TF
Location: 23156 - 24181 (+)
Gene ID: HRGMv2_0541_13_17
Type: TC
Location: 24633 - 25946 (+)
Gene ID: HRGMv2_0541_13_18
Type: CAZyme
Location: 26055 - 28817 (+)
Gene ID: HRGMv2_0541_13_19
Type: CAZyme
Location: 28901 - 31039 (+)
Gene ID: HRGMv2_0541_13_20
Type: CAZyme
Location: 31202 - 33106 (+)
Gene ID: HRGMv2_0541_13_21
Type: CAZyme
Location: 33322 - 35193 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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