Genome Details
Selected Rep_genome_ID: HRGMv2_0343
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900761235
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0343 | 2,122,638 | 99.51% | 0.48% | UK | Europe | HRGM |
| MGYG000004241 | 2,156,541 | 97.6% | 0.48% | United Kingdom | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0343_CGC15 | CGCFAM_00006 | Yes | 7 | 3 | |
| HRGMv2_0343_CGC5 | CGCFAM_00128 | Yes | 14 | 5 | |
| HRGMv2_0343_CGC4 | CGCFAM_00145 | Yes | 5 | 2 | |
| HRGMv2_0343_CGC20 | CGCFAM_01177 | Yes | 8 | 3 | |
| HRGMv2_0343_CGC14 | CGCFAM_02447 | Yes | 7 | 1 | |
| HRGMv2_0343_CGC17 | CGCFAM_02477 | Yes | 5 | 1 | |
| HRGMv2_0343_CGC10 | CGCFAM_03328 | Yes | 14 | 2 | |
| HRGMv2_0343_CGC6 | CGCFAM_04752 | Yes | 4 | 1 | |
| HRGMv2_0343_CGC11 | CGCFAM_04867 | Yes | 6 | 2 | |
| HRGMv2_0343_CGC16 | CGCFAM_07247 | Yes | 5 | 1 |
Top CAZyme Families