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Cluster: HRGMv2_0343_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0343_23 HRGMv2_0343_23_11 9644 9880 - 3.D.1.6.4
peptidase HRGMv2_0343_23 HRGMv2_0343_23_12 10121 10822 + S51.001
pfam HRGMv2_0343_23 HRGMv2_0343_23_13 10881 11246 + UPF0102
CAZyme HRGMv2_0343_23 HRGMv2_0343_23_14 11305 12534 + GT30
CAZyme HRGMv2_0343_23 HRGMv2_0343_23_15 12578 13483 - GT2
CAZyme HRGMv2_0343_23 HRGMv2_0343_23_16 13618 14907 + CE7
NULL(UNKNOWN) HRGMv2_0343_23 HRGMv2_0343_23_17 14801 15316 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0343_23 HRGMv2_0343_23_18 15321 16253 - 2.A.19.5.2
Gene ID: HRGMv2_0343_23_11
Type: TC
Location: 9644 - 9880 (-)
Gene ID: HRGMv2_0343_23_12
Type: peptidase
Location: 10121 - 10822 (+)
Gene ID: HRGMv2_0343_23_13
Type: pfam
Location: 10881 - 11246 (+)
Gene ID: HRGMv2_0343_23_14
Type: CAZyme
Location: 11305 - 12534 (+)
Gene ID: HRGMv2_0343_23_15
Type: CAZyme
Location: 12578 - 13483 (-)
Gene ID: HRGMv2_0343_23_16
Type: CAZyme
Location: 13618 - 14907 (+)
Gene ID: HRGMv2_0343_23_17
Type:
Location: 14801 - 15316 (-)
Gene ID: HRGMv2_0343_23_18
Type: TC
Location: 15321 - 16253 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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