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Cluster: HRGMv2_0343_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0343_3 HRGMv2_0343_3_112 142635 144059 + GH30_3
TF HRGMv2_0343_3 HRGMv2_0343_3_113 144172 144930 - LytTR
TC HRGMv2_0343_3 HRGMv2_0343_3_114 144927 146345 - 8.A.59.2.1
TC HRGMv2_0343_3 HRGMv2_0343_3_115 146581 147894 + 2.A.2.6.2
TC HRGMv2_0343_3 HRGMv2_0343_3_116 147941 150964 + 1.B.14.6.1
TC HRGMv2_0343_3 HRGMv2_0343_3_117 151001 152641 + 8.A.46.1.1
pfam HRGMv2_0343_3 HRGMv2_0343_3_118 152672 154612 + SusE
CAZyme HRGMv2_0343_3 HRGMv2_0343_3_119 154788 156815 + GH13_36
CAZyme HRGMv2_0343_3 HRGMv2_0343_3_120 156870 158216 + GH13
CAZyme HRGMv2_0343_3 HRGMv2_0343_3_121 158213 160093 + GH13_46
CAZyme HRGMv2_0343_3 HRGMv2_0343_3_122 160180 162375 + GH97
sulfatase HRGMv2_0343_3 HRGMv2_0343_3_123 162487 164163 - S1_16
pfam HRGMv2_0343_3 HRGMv2_0343_3_124 164320 165246 + GDPD | DUF4996
TC HRGMv2_0343_3 HRGMv2_0343_3_125 165253 166644 + 2.A.1.4.6
Gene ID: HRGMv2_0343_3_112
Type: CAZyme
Location: 142635 - 144059 (+)
Gene ID: HRGMv2_0343_3_113
Type: TF
Location: 144172 - 144930 (-)
Gene ID: HRGMv2_0343_3_114
Type: TC
Location: 144927 - 146345 (-)
Gene ID: HRGMv2_0343_3_115
Type: TC
Location: 146581 - 147894 (+)
Gene ID: HRGMv2_0343_3_116
Type: TC
Location: 147941 - 150964 (+)
Gene ID: HRGMv2_0343_3_117
Type: TC
Location: 151001 - 152641 (+)
Gene ID: HRGMv2_0343_3_118
Type: pfam
Location: 152672 - 154612 (+)
Gene ID: HRGMv2_0343_3_119
Type: CAZyme
Location: 154788 - 156815 (+)
Gene ID: HRGMv2_0343_3_120
Type: CAZyme
Location: 156870 - 158216 (+)
Gene ID: HRGMv2_0343_3_121
Type: CAZyme
Location: 158213 - 160093 (+)
Gene ID: HRGMv2_0343_3_122
Type: CAZyme
Location: 160180 - 162375 (+)
Gene ID: HRGMv2_0343_3_123
Type: sulfatase
Location: 162487 - 164163 (-)
Gene ID: HRGMv2_0343_3_124
Type: pfam
Location: 164320 - 165246 (+)
Gene ID: HRGMv2_0343_3_125
Type: TC
Location: 165253 - 166644 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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