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Cluster: HRGMv2_0343_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0343_6 HRGMv2_0343_6_43 43738 45321 - 2.A.17.1.3
CAZyme HRGMv2_0343_6 HRGMv2_0343_6_44 45538 47571 + GH13_8
NULL(UNKNOWN) HRGMv2_0343_6 HRGMv2_0343_6_45 47713 48096 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0343_6 HRGMv2_0343_6_46 48134 50620 - 8.A.3.1.2
pfam HRGMv2_0343_6 HRGMv2_0343_6_47 50641 51453 - Poly_export | SLBB | SLBB_2
CAZyme HRGMv2_0343_6 HRGMv2_0343_6_48 51649 52926 + GH13
pfam HRGMv2_0343_6 HRGMv2_0343_6_49 53147 54733 + NAD_synthase
pfam HRGMv2_0343_6 HRGMv2_0343_6_50 54748 55179 + RseC_MucC
TC HRGMv2_0343_6 HRGMv2_0343_6_51 55183 56100 + 3.D.6.1.3
TC HRGMv2_0343_6 HRGMv2_0343_6_52 56117 57457 + 3.D.6.1.2
TC HRGMv2_0343_6 HRGMv2_0343_6_53 57530 58501 + 3.D.6.1.2
TC HRGMv2_0343_6 HRGMv2_0343_6_54 58539 59147 + 3.D.6.1.4
TC HRGMv2_0343_6 HRGMv2_0343_6_55 59134 59781 + 3.D.6.1.2
TC HRGMv2_0343_6 HRGMv2_0343_6_56 59785 60363 + 3.D.6.1.2
Gene ID: HRGMv2_0343_6_43
Type: TC
Location: 43738 - 45321 (-)
Gene ID: HRGMv2_0343_6_44
Type: CAZyme
Location: 45538 - 47571 (+)
Gene ID: HRGMv2_0343_6_45
Type:
Location: 47713 - 48096 (-)
Gene ID: HRGMv2_0343_6_46
Type: TC
Location: 48134 - 50620 (-)
Gene ID: HRGMv2_0343_6_47
Type: pfam
Location: 50641 - 51453 (-)
Gene ID: HRGMv2_0343_6_48
Type: CAZyme
Location: 51649 - 52926 (+)
Gene ID: HRGMv2_0343_6_49
Type: pfam
Location: 53147 - 54733 (+)
Gene ID: HRGMv2_0343_6_50
Type: pfam
Location: 54748 - 55179 (+)
Gene ID: HRGMv2_0343_6_51
Type: TC
Location: 55183 - 56100 (+)
Gene ID: HRGMv2_0343_6_52
Type: TC
Location: 56117 - 57457 (+)
Gene ID: HRGMv2_0343_6_53
Type: TC
Location: 57530 - 58501 (+)
Gene ID: HRGMv2_0343_6_54
Type: TC
Location: 58539 - 59147 (+)
Gene ID: HRGMv2_0343_6_55
Type: TC
Location: 59134 - 59781 (+)
Gene ID: HRGMv2_0343_6_56
Type: TC
Location: 59785 - 60363 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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