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Cluster: HRGMv2_0343_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0343_11 HRGMv2_0343_11_22 26613 28034 + 2.A.66.2.10
CAZyme HRGMv2_0343_11 HRGMv2_0343_11_23 28034 28933 + GT2
pfam HRGMv2_0343_11 HRGMv2_0343_11_24 28938 30170 + Wzy_C
CAZyme HRGMv2_0343_11 HRGMv2_0343_11_25 30167 31279 + GT4
pfam HRGMv2_0343_11 HRGMv2_0343_11_26 31272 32012 + Hexapep | Hexapep_2
pfam HRGMv2_0343_11 HRGMv2_0343_11_27 32021 32524 + Hexapep | Hexapep_2
CAZyme HRGMv2_0343_11 HRGMv2_0343_11_28 32530 33594 + GT4
Gene ID: HRGMv2_0343_11_22
Type: TC
Location: 26613 - 28034 (+)
Gene ID: HRGMv2_0343_11_23
Type: CAZyme
Location: 28034 - 28933 (+)
Gene ID: HRGMv2_0343_11_24
Type: pfam
Location: 28938 - 30170 (+)
Gene ID: HRGMv2_0343_11_25
Type: CAZyme
Location: 30167 - 31279 (+)
Gene ID: HRGMv2_0343_11_26
Type: pfam
Location: 31272 - 32012 (+)
Gene ID: HRGMv2_0343_11_27
Type: pfam
Location: 32021 - 32524 (+)
Gene ID: HRGMv2_0343_11_28
Type: CAZyme
Location: 32530 - 33594 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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