Cluster: HRGMv2_0343_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0343
- CGC Family ID: CGCFAM_04752
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0343_4 | HRGMv2_0343_4_104 | 133753 | 134793 | + | GT2 |
| pfam | HRGMv2_0343_4 | HRGMv2_0343_4_105 | 134965 | 136863 | - | CN_hydrolase | NAD_synthase |
| peptidase | HRGMv2_0343_4 | HRGMv2_0343_4_106 | 136871 | 138088 | - | M20.003 |
| TC | HRGMv2_0343_4 | HRGMv2_0343_4_107 | 138212 | 140155 | - | 2.A.67.4.2 |
Gene ID: HRGMv2_0343_4_104
Type: CAZyme
Location: 133753 - 134793 (+)
Type: CAZyme
Location: 133753 - 134793 (+)
Gene ID: HRGMv2_0343_4_105
Type: pfam
Location: 134965 - 136863 (-)
Type: pfam
Location: 134965 - 136863 (-)
Gene ID: HRGMv2_0343_4_106
Type: peptidase
Location: 136871 - 138088 (-)
Type: peptidase
Location: 136871 - 138088 (-)
Gene ID: HRGMv2_0343_4_107
Type: TC
Location: 138212 - 140155 (-)
Type: TC
Location: 138212 - 140155 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900761235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.