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Genome Details

Selected Rep_genome_ID: HRGMv2_0275
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900552515
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0275 3,120,653 98.7% 0% Japan Asia HRGM
KY207_bin.1 3,155,629 98.33% 0.28% NA Africa H3AfricaPhase2
MGYG000001975 2,921,145 97% 0.25% Denmark Europe UHGG
Rep_209 4,057,846 98.8889% 1.11111% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0275_CGC34 CGCFAM_00001 Yes 6 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0275_CGC15 CGCFAM_00002 Yes 7 3
HRGMv2_0275_CGC24 CGCFAM_00017 Yes 7 1 fructan
HRGMv2_0275_CGC13 CGCFAM_00023 Yes 4 1
HRGMv2_0275_CGC29 CGCFAM_00031 Yes 8 3 pectin/galactan
HRGMv2_0275_CGC31 CGCFAM_00043 Yes 11 5 alpha-glucan
HRGMv2_0275_CGC1 CGCFAM_00082 Yes 7 2 beta-mannan
HRGMv2_0275_CGC26 CGCFAM_00341 Yes 4 1
HRGMv2_0275_CGC25 CGCFAM_00431 Yes 7 1
HRGMv2_0275_CGC36 CGCFAM_00521 Yes 6 1
HRGMv2_0275_CGC32 CGCFAM_00543 Yes 6 2
HRGMv2_0275_CGC44 CGCFAM_00776 Yes 6 3
HRGMv2_0275_CGC6 CGCFAM_00777 Yes 4 1
HRGMv2_0275_CGC16 CGCFAM_01356 Yes 6 4
HRGMv2_0275_CGC12 CGCFAM_01888 Yes 6 1
HRGMv2_0275_CGC19 CGCFAM_02013 Yes 6 1
HRGMv2_0275_CGC7 CGCFAM_02015 Yes 7 1
HRGMv2_0275_CGC37 CGCFAM_02956 Yes 8 2
HRGMv2_0275_CGC21 CGCFAM_03278 Yes 6 2
HRGMv2_0275_CGC45 CGCFAM_04697 Yes 3 1
HRGMv2_0275_CGC30 CGCFAM_04698 Yes 7 1
HRGMv2_0275_CGC35 CGCFAM_05472 Yes 5 1
HRGMv2_0275_CGC39 CGCFAM_07818 Yes 5 1
Top CAZyme Families