Cluster: HRGMv2_0275_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0275
- CGC Family ID: CGCFAM_02013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0275_18 | HRGMv2_0275_18_11 | 12732 | 14864 | - | PL8_3 |
| pfam | HRGMv2_0275_18 | HRGMv2_0275_18_12 | 14976 | 16490 | - | Metallophos | MetallophosC | MetallophosN |
| TC | HRGMv2_0275_18 | HRGMv2_0275_18_13 | 16806 | 18275 | + | 2.A.21.3.7 |
| pfam | HRGMv2_0275_18 | HRGMv2_0275_18_14 | 18449 | 19792 | + | AAA_14 | DUF4143 |
| TC | HRGMv2_0275_18 | HRGMv2_0275_18_15 | 20182 | 23082 | + | 1.B.14.6.1 |
| TC | HRGMv2_0275_18 | HRGMv2_0275_18_16 | 23098 | 24768 | + | 8.A.46.1.6 |
Gene ID: HRGMv2_0275_18_11
Type: CAZyme
Location: 12732 - 14864 (-)
Type: CAZyme
Location: 12732 - 14864 (-)
Gene ID: HRGMv2_0275_18_12
Type: pfam
Location: 14976 - 16490 (-)
Type: pfam
Location: 14976 - 16490 (-)
Gene ID: HRGMv2_0275_18_13
Type: TC
Location: 16806 - 18275 (+)
Type: TC
Location: 16806 - 18275 (+)
Gene ID: HRGMv2_0275_18_14
Type: pfam
Location: 18449 - 19792 (+)
Type: pfam
Location: 18449 - 19792 (+)
Gene ID: HRGMv2_0275_18_15
Type: TC
Location: 20182 - 23082 (+)
Type: TC
Location: 20182 - 23082 (+)
Gene ID: HRGMv2_0275_18_16
Type: TC
Location: 23098 - 24768 (+)
Type: TC
Location: 23098 - 24768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900552515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0275_18_14 | vegetarian > vegan | 1.57752 | 0.04496 |