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Cluster: HRGMv2_0275_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0275_45 HRGMv2_0275_45_2 2860 5955 + 1.B.14.6.1
pfam HRGMv2_0275_45 HRGMv2_0275_45_3 6000 7769 + SusD_RagB | SusD-like_3
STP HRGMv2_0275_45 HRGMv2_0275_45_4 8180 9235 + FecR
TC HRGMv2_0275_45 HRGMv2_0275_45_5 9315 12617 + 1.B.14.6.1
pfam HRGMv2_0275_45 HRGMv2_0275_45_6 12643 14193 + SusD_RagB | SusD-like_3
pfam HRGMv2_0275_45 HRGMv2_0275_45_7 14210 15223 + Metallophos
CAZyme HRGMv2_0275_45 HRGMv2_0275_45_8 15326 17308 + GH65
CAZyme HRGMv2_0275_45 HRGMv2_0275_45_9 17319 19049 + GH13_44
Gene ID: HRGMv2_0275_45_2
Type: TC
Location: 2860 - 5955 (+)
Gene ID: HRGMv2_0275_45_3
Type: pfam
Location: 6000 - 7769 (+)
Gene ID: HRGMv2_0275_45_4
Type: STP
Location: 8180 - 9235 (+)
Gene ID: HRGMv2_0275_45_5
Type: TC
Location: 9315 - 12617 (+)
Gene ID: HRGMv2_0275_45_6
Type: pfam
Location: 12643 - 14193 (+)
Gene ID: HRGMv2_0275_45_7
Type: pfam
Location: 14210 - 15223 (+)
Gene ID: HRGMv2_0275_45_8
Type: CAZyme
Location: 15326 - 17308 (+)
Gene ID: HRGMv2_0275_45_9
Type: CAZyme
Location: 17319 - 19049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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