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Cluster: HRGMv2_0275_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0275_7 HRGMv2_0275_7_13 16084 19008 + 1.B.14.6.13
TC HRGMv2_0275_7 HRGMv2_0275_7_14 19053 20660 + 8.A.46.2.1
CAZyme HRGMv2_0275_7 HRGMv2_0275_7_15 20713 21834 + GH18
pfam HRGMv2_0275_7 HRGMv2_0275_7_16 21877 23037 + BT_3987-like_N | Laminin_G_3
pfam HRGMv2_0275_7 HRGMv2_0275_7_17 23600 24712 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369
TC HRGMv2_0275_7 HRGMv2_0275_7_18 25119 26483 + 2.A.66.1.32
TC HRGMv2_0275_7 HRGMv2_0275_7_19 26512 27153 + 2.A.115.2.14
Gene ID: HRGMv2_0275_7_13
Type: TC
Location: 16084 - 19008 (+)
Gene ID: HRGMv2_0275_7_14
Type: TC
Location: 19053 - 20660 (+)
Gene ID: HRGMv2_0275_7_15
Type: CAZyme
Location: 20713 - 21834 (+)
Gene ID: HRGMv2_0275_7_16
Type: pfam
Location: 21877 - 23037 (+)
Gene ID: HRGMv2_0275_7_17
Type: pfam
Location: 23600 - 24712 (+)
Gene ID: HRGMv2_0275_7_18
Type: TC
Location: 25119 - 26483 (+)
Gene ID: HRGMv2_0275_7_19
Type: TC
Location: 26512 - 27153 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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