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Cluster: HRGMv2_0275_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0275_32 HRGMv2_0275_32_12 14696 15835 + GT19
pfam HRGMv2_0275_32 HRGMv2_0275_32_13 16341 17978 - DUF6377
TC HRGMv2_0275_32 HRGMv2_0275_32_14 18295 21297 + 1.B.14.6.1
TC HRGMv2_0275_32 HRGMv2_0275_32_15 21312 22805 + 8.A.46.1.3
pfam HRGMv2_0275_32 HRGMv2_0275_32_16 22844 24349 + SusE | SusF_SusE | SusF_SusE
CAZyme HRGMv2_0275_32 HRGMv2_0275_32_17 24376 26151 + GH66
CAZyme HRGMv2_0275_32 HRGMv2_0275_32_18 26166 28295 + GH97
CAZyme HRGMv2_0275_32 HRGMv2_0275_32_19 28419 30974 + GH31_15
peptidase HRGMv2_0275_32 HRGMv2_0275_32_20 31237 32196 - S09.B04
pfam HRGMv2_0275_32 HRGMv2_0275_32_21 32529 33455 + CorA
CAZyme HRGMv2_0275_32 HRGMv2_0275_32_22 33646 35802 + CBM20 | GH77
Gene ID: HRGMv2_0275_32_12
Type: CAZyme
Location: 14696 - 15835 (+)
Gene ID: HRGMv2_0275_32_13
Type: pfam
Location: 16341 - 17978 (-)
Gene ID: HRGMv2_0275_32_14
Type: TC
Location: 18295 - 21297 (+)
Gene ID: HRGMv2_0275_32_15
Type: TC
Location: 21312 - 22805 (+)
Gene ID: HRGMv2_0275_32_16
Type: pfam
Location: 22844 - 24349 (+)
Gene ID: HRGMv2_0275_32_17
Type: CAZyme
Location: 24376 - 26151 (+)
Gene ID: HRGMv2_0275_32_18
Type: CAZyme
Location: 26166 - 28295 (+)
Gene ID: HRGMv2_0275_32_19
Type: CAZyme
Location: 28419 - 30974 (+)
Gene ID: HRGMv2_0275_32_20
Type: peptidase
Location: 31237 - 32196 (-)
Gene ID: HRGMv2_0275_32_21
Type: pfam
Location: 32529 - 33455 (+)
Gene ID: HRGMv2_0275_32_22
Type: CAZyme
Location: 33646 - 35802 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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