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Genome Details

Selected Rep_genome_ID: HRGMv2_0269
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
UBA932
→
Genus
Cryptobacteroides
→
Species
Cryptobacteroides sp000434935
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG225_68 3,195,197 95.95% 0% NA Africa H3AfricaPhase2
CGMR066226 2,400,409 96.9% 0% China Asia CGMR
GCA_021623725.1_ASM2162372v1_genomic 2,903,326 96.43% 0.24% NA Africa H3AfricaPhase1
GCA_021625025.1_ASM2162502v1_genomic 3,300,811 95.94% 2.38% NA Africa H3AfricaPhase1
GCA_021628945.1_ASM2162894v1_genomic 3,047,767 96.43% 0.05% NA Africa H3AfricaPhase1
HRGMv2_0269 2,697,878 96.9% 0% UK Europe HRGM
MGYG000001085 2,352,626 96.9% 0% Sweden Europe UHGG
Rep_55 3,151,702 96.4286% 0.714286% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0269_CGC11 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0269_CGC12 CGCFAM_00001 Yes 8 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0269_CGC33 CGCFAM_00001 Yes 9 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0269_CGC8 CGCFAM_00111 Yes 6 3 alpha-glucan
HRGMv2_0269_CGC4 CGCFAM_00152 Yes 8 3
HRGMv2_0269_CGC16 CGCFAM_00213 Yes 4 1 beta-glucan
HRGMv2_0269_CGC3 CGCFAM_00260 Yes 4 2
HRGMv2_0269_CGC32 CGCFAM_00406 Yes 5 1
HRGMv2_0269_CGC17 CGCFAM_00734 Yes 6 1
HRGMv2_0269_CGC14 CGCFAM_00838 Yes 6 1
HRGMv2_0269_CGC22 CGCFAM_01445 Yes 15 6
HRGMv2_0269_CGC29 CGCFAM_01854 Yes 3 1
HRGMv2_0269_CGC15 CGCFAM_02146 Yes 4 1
HRGMv2_0269_CGC30 CGCFAM_02950 Yes 8 4
HRGMv2_0269_CGC24 CGCFAM_05967 Yes 5 1
HRGMv2_0269_CGC26 CGCFAM_08043 Yes 3 1
HRGMv2_0269_CGC6 CGCFAM_08143 Yes 5 1
HRGMv2_0269_CGC2 CGCFAM_09278 Yes 4 1
HRGMv2_0269_CGC9 CGCFAM_09563 Yes 5 2
Top CAZyme Families