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Cluster: HRGMv2_0269_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0269_11 HRGMv2_0269_11_53 66910 68394 - GH37
CAZyme HRGMv2_0269_11 HRGMv2_0269_11_54 68391 70553 - GH3
CAZyme HRGMv2_0269_11 HRGMv2_0269_11_55 70554 72758 - GH3
NULL(UNKNOWN) HRGMv2_0269_11 HRGMv2_0269_11_56 72822 74231 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0269_11 HRGMv2_0269_11_57 74245 74376 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0269_11 HRGMv2_0269_11_58 74383 76248 - GH5_39
pfam HRGMv2_0269_11 HRGMv2_0269_11_59 76266 77963 - SusD_RagB
TC HRGMv2_0269_11 HRGMv2_0269_11_60 77988 81167 - 1.B.14.6.1
Gene ID: HRGMv2_0269_11_53
Type: CAZyme
Location: 66910 - 68394 (-)
Gene ID: HRGMv2_0269_11_54
Type: CAZyme
Location: 68391 - 70553 (-)
Gene ID: HRGMv2_0269_11_55
Type: CAZyme
Location: 70554 - 72758 (-)
Gene ID: HRGMv2_0269_11_56
Type:
Location: 72822 - 74231 (-)
Gene ID: HRGMv2_0269_11_57
Type:
Location: 74245 - 74376 (-)
Gene ID: HRGMv2_0269_11_58
Type: CAZyme
Location: 74383 - 76248 (-)
Gene ID: HRGMv2_0269_11_59
Type: pfam
Location: 76266 - 77963 (-)
Gene ID: HRGMv2_0269_11_60
Type: TC
Location: 77988 - 81167 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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