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Cluster: HRGMv2_0269_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0269_2 HRGMv2_0269_2_23 28940 31801 + GH92
pfam HRGMv2_0269_2 HRGMv2_0269_2_24 31815 33755 + Alk_phosphatase | Metalloenzyme
CAZyme HRGMv2_0269_2 HRGMv2_0269_2_25 33789 35366 + GH63
pfam HRGMv2_0269_2 HRGMv2_0269_2_26 35383 36384 + Metallophos
pfam HRGMv2_0269_2 HRGMv2_0269_2_27 36404 37240 + ROK
CAZyme HRGMv2_0269_2 HRGMv2_0269_2_28 37219 38715 + GH20
TC HRGMv2_0269_2 HRGMv2_0269_2_29 38785 41970 + 1.B.14.6.1
TC HRGMv2_0269_2 HRGMv2_0269_2_30 41995 43629 + 8.A.46.1.3
Gene ID: HRGMv2_0269_2_23
Type: CAZyme
Location: 28940 - 31801 (+)
Gene ID: HRGMv2_0269_2_24
Type: pfam
Location: 31815 - 33755 (+)
Gene ID: HRGMv2_0269_2_25
Type: CAZyme
Location: 33789 - 35366 (+)
Gene ID: HRGMv2_0269_2_26
Type: pfam
Location: 35383 - 36384 (+)
Gene ID: HRGMv2_0269_2_27
Type: pfam
Location: 36404 - 37240 (+)
Gene ID: HRGMv2_0269_2_28
Type: CAZyme
Location: 37219 - 38715 (+)
Gene ID: HRGMv2_0269_2_29
Type: TC
Location: 38785 - 41970 (+)
Gene ID: HRGMv2_0269_2_30
Type: TC
Location: 41995 - 43629 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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