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Cluster: HRGMv2_0269_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0269_3 HRGMv2_0269_3_66 84740 86023 - GH20
NULL(UNKNOWN) HRGMv2_0269_3 HRGMv2_0269_3_67 86102 86845 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0269_3 HRGMv2_0269_3_68 86849 89164 - GH3
NULL(UNKNOWN) HRGMv2_0269_3 HRGMv2_0269_3_69 89240 90337 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0269_3 HRGMv2_0269_3_70 90382 91269 - GH16_3
NULL(UNKNOWN) HRGMv2_0269_3 HRGMv2_0269_3_71 91279 92700 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0269_3 HRGMv2_0269_3_72 92714 94246 - SusD_RagB | SusD-like_2 | SusD-like_3
TC HRGMv2_0269_3 HRGMv2_0269_3_73 94274 97696 - 1.B.14.6.1
Gene ID: HRGMv2_0269_3_66
Type: CAZyme
Location: 84740 - 86023 (-)
Gene ID: HRGMv2_0269_3_67
Type:
Location: 86102 - 86845 (-)
Gene ID: HRGMv2_0269_3_68
Type: CAZyme
Location: 86849 - 89164 (-)
Gene ID: HRGMv2_0269_3_69
Type:
Location: 89240 - 90337 (-)
Gene ID: HRGMv2_0269_3_70
Type: CAZyme
Location: 90382 - 91269 (-)
Gene ID: HRGMv2_0269_3_71
Type:
Location: 91279 - 92700 (-)
Gene ID: HRGMv2_0269_3_72
Type: pfam
Location: 92714 - 94246 (-)
Gene ID: HRGMv2_0269_3_73
Type: TC
Location: 94274 - 97696 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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