Cluster: HRGMv2_0269_CGC22
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0269
- CGC Family ID: CGCFAM_01445
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0269_8 | HRGMv2_0269_8_31 | 32085 | 32915 | - | 3.A.1.132.6 |
| NULL(UNKNOWN) | HRGMv2_0269_8 | HRGMv2_0269_8_32 | 32921 | 33178 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0269_8 | HRGMv2_0269_8_33 | 33082 | 35301 | - | GH97 |
| CAZyme | HRGMv2_0269_8 | HRGMv2_0269_8_34 | 35310 | 37238 | - | GH13_46 |
| CAZyme | HRGMv2_0269_8 | HRGMv2_0269_8_35 | 37250 | 38932 | - | GH13_36 |
| CAZyme | HRGMv2_0269_8 | HRGMv2_0269_8_36 | 38936 | 40252 | - | GH13 |
| CAZyme | HRGMv2_0269_8 | HRGMv2_0269_8_37 | 40249 | 41592 | - | GH13 |
| NULL(UNKNOWN) | HRGMv2_0269_8 | HRGMv2_0269_8_38 | 41597 | 43030 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0269_8 | HRGMv2_0269_8_39 | 43039 | 44808 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0269_8 | HRGMv2_0269_8_40 | 44858 | 47803 | - | 1.B.14.6.1 |
| TC | HRGMv2_0269_8 | HRGMv2_0269_8_41 | 47846 | 49147 | - | 2.A.2.6.2 |
| NULL(UNKNOWN) | HRGMv2_0269_8 | HRGMv2_0269_8_42 | 49224 | 49457 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0269_8 | HRGMv2_0269_8_43 | 49479 | 50759 | + | 8.A.59.2.1 |
| TF | HRGMv2_0269_8 | HRGMv2_0269_8_44 | 50764 | 51528 | + | LytTR |
| CAZyme | HRGMv2_0269_8 | HRGMv2_0269_8_45 | 51645 | 53786 | + | GH77 |
Gene ID: HRGMv2_0269_8_31
Type: TC
Location: 32085 - 32915 (-)
Type: TC
Location: 32085 - 32915 (-)
Gene ID: HRGMv2_0269_8_32
Type:
Location: 32921 - 33178 (+)
Type:
Location: 32921 - 33178 (+)
Gene ID: HRGMv2_0269_8_33
Type: CAZyme
Location: 33082 - 35301 (-)
Type: CAZyme
Location: 33082 - 35301 (-)
Gene ID: HRGMv2_0269_8_34
Type: CAZyme
Location: 35310 - 37238 (-)
Type: CAZyme
Location: 35310 - 37238 (-)
Gene ID: HRGMv2_0269_8_35
Type: CAZyme
Location: 37250 - 38932 (-)
Type: CAZyme
Location: 37250 - 38932 (-)
Gene ID: HRGMv2_0269_8_36
Type: CAZyme
Location: 38936 - 40252 (-)
Type: CAZyme
Location: 38936 - 40252 (-)
Gene ID: HRGMv2_0269_8_37
Type: CAZyme
Location: 40249 - 41592 (-)
Type: CAZyme
Location: 40249 - 41592 (-)
Gene ID: HRGMv2_0269_8_38
Type:
Location: 41597 - 43030 (-)
Type:
Location: 41597 - 43030 (-)
Gene ID: HRGMv2_0269_8_39
Type: pfam
Location: 43039 - 44808 (-)
Type: pfam
Location: 43039 - 44808 (-)
Gene ID: HRGMv2_0269_8_40
Type: TC
Location: 44858 - 47803 (-)
Type: TC
Location: 44858 - 47803 (-)
Gene ID: HRGMv2_0269_8_41
Type: TC
Location: 47846 - 49147 (-)
Type: TC
Location: 47846 - 49147 (-)
Gene ID: HRGMv2_0269_8_42
Type:
Location: 49224 - 49457 (+)
Type:
Location: 49224 - 49457 (+)
Gene ID: HRGMv2_0269_8_43
Type: TC
Location: 49479 - 50759 (+)
Type: TC
Location: 49479 - 50759 (+)
Gene ID: HRGMv2_0269_8_44
Type: TF
Location: 50764 - 51528 (+)
Type: TF
Location: 50764 - 51528 (+)
Gene ID: HRGMv2_0269_8_45
Type: CAZyme
Location: 51645 - 53786 (+)
Type: CAZyme
Location: 51645 - 53786 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000434935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.