Cluster: HRGMv2_0269_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0269
- CGC Family ID: CGCFAM_00838
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0269_4 | HRGMv2_0269_4_83 | 90146 | 93199 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | HRGMv2_0269_4 | HRGMv2_0269_4_84 | 93220 | 95352 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_0269_4 | HRGMv2_0269_4_85 | 95384 | 98251 | - | HTH_AraC |
| CAZyme | HRGMv2_0269_4 | HRGMv2_0269_4_86 | 98269 | 100227 | - | GH93 |
| NULL(UNKNOWN) | HRGMv2_0269_4 | HRGMv2_0269_4_87 | 100310 | 101515 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0269_4 | HRGMv2_0269_4_88 | 101632 | 103902 | - | 1.B.14.1.4 |
Gene ID: HRGMv2_0269_4_83
Type: TC
Location: 90146 - 93199 (-)
Type: TC
Location: 90146 - 93199 (-)
Gene ID: HRGMv2_0269_4_84
Type:
Location: 93220 - 95352 (-)
Type:
Location: 93220 - 95352 (-)
Gene ID: HRGMv2_0269_4_85
Type: TF
Location: 95384 - 98251 (-)
Type: TF
Location: 95384 - 98251 (-)
Gene ID: HRGMv2_0269_4_86
Type: CAZyme
Location: 98269 - 100227 (-)
Type: CAZyme
Location: 98269 - 100227 (-)
Gene ID: HRGMv2_0269_4_87
Type:
Location: 100310 - 101515 (-)
Type:
Location: 100310 - 101515 (-)
Gene ID: HRGMv2_0269_4_88
Type: TC
Location: 101632 - 103902 (-)
Type: TC
Location: 101632 - 103902 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000434935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.