Genome Details
Selected Rep_genome_ID: HRGMv2_0082
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium vaginale
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B36.bin_29 | 1,641,624 | 96.99% | 1.36% | China(Inner Mongolia) | Asia | IMGG |
| HRGMv2_0082 | 1,643,524 | 97.57% | 0.454% | South Korea | Asia | HRGM |
| Rep_830 | 1,490,158 | 97.2348% | 0.454545% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0082_CGC17 | CGCFAM_00013 | Yes | 4 | 1 | |
| HRGMv2_0082_CGC19 | CGCFAM_00526 | Yes | 3 | 1 | |
| HRGMv2_0082_CGC13 | CGCFAM_00711 | Yes | 4 | 1 | |
| HRGMv2_0082_CGC15 | CGCFAM_00825 | Yes | 18 | 4 | alpha-glucan |
| HRGMv2_0082_CGC12 | CGCFAM_01460 | Yes | 3 | 1 | |
| HRGMv2_0082_CGC20 | CGCFAM_01746 | Yes | 4 | 1 | |
| HRGMv2_0082_CGC8 | CGCFAM_01773 | Yes | 8 | 4 | |
| HRGMv2_0082_CGC11 | CGCFAM_01884 | Yes | 10 | 4 | |
| HRGMv2_0082_CGC16 | CGCFAM_02456 | Yes | 7 | 1 | |
| HRGMv2_0082_CGC1 | CGCFAM_03418 | Yes | 11 | 2 |
Top CAZyme Families