Cluster: HRGMv2_0082_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0082
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0082_13 | HRGMv2_0082_13_7 | 8205 | 9431 | - | GT28 |
| TC | HRGMv2_0082_13 | HRGMv2_0082_13_8 | 9564 | 10892 | - | 2.A.103.1.4 |
| pfam | HRGMv2_0082_13 | HRGMv2_0082_13_9 | 10879 | 12456 | - | Mur_ligase_M |
| TC | HRGMv2_0082_13 | HRGMv2_0082_13_10 | 12534 | 13637 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0082_13_7
Type: CAZyme
Location: 8205 - 9431 (-)
Type: CAZyme
Location: 8205 - 9431 (-)
Gene ID: HRGMv2_0082_13_8
Type: TC
Location: 9564 - 10892 (-)
Type: TC
Location: 9564 - 10892 (-)
Gene ID: HRGMv2_0082_13_9
Type: pfam
Location: 10879 - 12456 (-)
Type: pfam
Location: 10879 - 12456 (-)
Gene ID: HRGMv2_0082_13_10
Type: TC
Location: 12534 - 13637 (-)
Type: TC
Location: 12534 - 13637 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium vaginale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.