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Cluster: HRGMv2_0082_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0082_12 HRGMv2_0082_12_24 39053 41116 - 2.A.36.3.2
STP HRGMv2_0082_12 HRGMv2_0082_12_25 41488 43014 + Aminotran_1_2
TF HRGMv2_0082_12 HRGMv2_0082_12_26 43157 44215 - LacI
CAZyme HRGMv2_0082_12 HRGMv2_0082_12_27 44245 45624 - GH13_20
TC HRGMv2_0082_12 HRGMv2_0082_12_28 45657 46478 - 3.A.1.1.36
TC HRGMv2_0082_12 HRGMv2_0082_12_29 46478 47383 - 3.A.1.1.36
TC HRGMv2_0082_12 HRGMv2_0082_12_30 47468 48739 - 3.A.1.1.44
Gene ID: HRGMv2_0082_12_24
Type: TC
Location: 39053 - 41116 (-)
Gene ID: HRGMv2_0082_12_25
Type: STP
Location: 41488 - 43014 (+)
Gene ID: HRGMv2_0082_12_26
Type: TF
Location: 43157 - 44215 (-)
Gene ID: HRGMv2_0082_12_27
Type: CAZyme
Location: 44245 - 45624 (-)
Gene ID: HRGMv2_0082_12_28
Type: TC
Location: 45657 - 46478 (-)
Gene ID: HRGMv2_0082_12_29
Type: TC
Location: 46478 - 47383 (-)
Gene ID: HRGMv2_0082_12_30
Type: TC
Location: 47468 - 48739 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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