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Cluster: HRGMv2_0082_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0082_5 HRGMv2_0082_5_26 36080 38023 + GH20
TF HRGMv2_0082_5 HRGMv2_0082_5_27 38113 39219 - LacI
CAZyme HRGMv2_0082_5 HRGMv2_0082_5_28 39392 40681 - GH5_18
TC HRGMv2_0082_5 HRGMv2_0082_5_29 40772 41614 - 3.A.1.1.20
TC HRGMv2_0082_5 HRGMv2_0082_5_30 41614 42630 - 3.A.1.1.4
STP HRGMv2_0082_5 HRGMv2_0082_5_31 42627 43910 - SBP_bac_1
CAZyme HRGMv2_0082_5 HRGMv2_0082_5_32 44267 47392 - GH38
CAZyme HRGMv2_0082_5 HRGMv2_0082_5_33 47716 49035 + GH125
Gene ID: HRGMv2_0082_5_26
Type: CAZyme
Location: 36080 - 38023 (+)
Gene ID: HRGMv2_0082_5_27
Type: TF
Location: 38113 - 39219 (-)
Gene ID: HRGMv2_0082_5_28
Type: CAZyme
Location: 39392 - 40681 (-)
Gene ID: HRGMv2_0082_5_29
Type: TC
Location: 40772 - 41614 (-)
Gene ID: HRGMv2_0082_5_30
Type: TC
Location: 41614 - 42630 (-)
Gene ID: HRGMv2_0082_5_31
Type: STP
Location: 42627 - 43910 (-)
Gene ID: HRGMv2_0082_5_32
Type: CAZyme
Location: 44267 - 47392 (-)
Gene ID: HRGMv2_0082_5_33
Type: CAZyme
Location: 47716 - 49035 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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