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Cluster: HRGMv2_0082_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0082_1 HRGMv2_0082_1_17 20882 22705 - 9.B.160.1.10
pfam HRGMv2_0082_1 HRGMv2_0082_1_18 23047 24372 + TGT
CAZyme HRGMv2_0082_1 HRGMv2_0082_1_19 24895 27630 + GH33
TF HRGMv2_0082_1 HRGMv2_0082_1_20 27614 28414 + GntR
CAZyme HRGMv2_0082_1 HRGMv2_0082_1_21 28902 30161 - CE9
sulfatase HRGMv2_0082_1 HRGMv2_0082_1_22 30223 31035 - S1_9
pfam HRGMv2_0082_1 HRGMv2_0082_1_23 31220 32179 - DHDPS
TC HRGMv2_0082_1 HRGMv2_0082_1_24 32351 33211 - 3.A.1.5.20
TC HRGMv2_0082_1 HRGMv2_0082_1_25 33208 35232 - 3.A.1.5.25
TC HRGMv2_0082_1 HRGMv2_0082_1_26 35234 36190 - 3.A.1.5.35
TC HRGMv2_0082_1 HRGMv2_0082_1_27 36338 37903 - 3.A.1.5.39
Gene ID: HRGMv2_0082_1_17
Type: TC
Location: 20882 - 22705 (-)
Gene ID: HRGMv2_0082_1_18
Type: pfam
Location: 23047 - 24372 (+)
Gene ID: HRGMv2_0082_1_19
Type: CAZyme
Location: 24895 - 27630 (+)
Gene ID: HRGMv2_0082_1_20
Type: TF
Location: 27614 - 28414 (+)
Gene ID: HRGMv2_0082_1_21
Type: CAZyme
Location: 28902 - 30161 (-)
Gene ID: HRGMv2_0082_1_22
Type: sulfatase
Location: 30223 - 31035 (-)
Gene ID: HRGMv2_0082_1_23
Type: pfam
Location: 31220 - 32179 (-)
Gene ID: HRGMv2_0082_1_24
Type: TC
Location: 32351 - 33211 (-)
Gene ID: HRGMv2_0082_1_25
Type: TC
Location: 33208 - 35232 (-)
Gene ID: HRGMv2_0082_1_26
Type: TC
Location: 35234 - 36190 (-)
Gene ID: HRGMv2_0082_1_27
Type: TC
Location: 36338 - 37903 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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