Genome Details
Selected Rep_genome_ID: CGMR060366
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR060366 | 2,821,912 | 99.46% | 0% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR060366_CGC34 | CGCFAM_00012 | Yes | 5 | 1 | host glycan/beta-glucan |
| CGMR060366_CGC6 | CGCFAM_00036 | Yes | 11 | 5 | |
| CGMR060366_CGC18 | CGCFAM_00209 | Yes | 6 | 1 | |
| CGMR060366_CGC24 | CGCFAM_00230 | Yes | 5 | 1 | |
| PUL0196_CGMR060366_C0 | CGCFAM_00243 | Yes | 9 | 2 | host glycan |
| CGMR060366_CGC15 | CGCFAM_00264 | Yes | 4 | 2 | |
| CGMR060366_CGC22 | CGCFAM_00510 | Yes | 3 | 1 | |
| CGMR060366_CGC33 | CGCFAM_01470 | Yes | 4 | 2 | fructan |
| CGMR060366_CGC17 | CGCFAM_02423 | Yes | 6 | 2 | |
| CGMR060366_CGC9 | CGCFAM_02932 | Yes | 5 | 2 | |
| CGMR060366_CGC10 | CGCFAM_04513 | Yes | 4 | 1 | |
| CGMR060366_CGC5 | CGCFAM_05682 | Yes | 6 | 1 | |
| CGMR060366_CGC7 | CGCFAM_05683 | Yes | 8 | 2 | |
| CGMR060366_CGC4 | CGCFAM_06383 | Yes | 12 | 4 | |
| CGMR060366_CGC12 | CGCFAM_07401 | Yes | 9 | 3 | |
| CGMR060366_CGC1 | CGCFAM_08775 | Yes | 7 | 2 | |
| CGMR060366_CGC13 | CGCFAM_08776 | Yes | 8 | 1 | |
| CGMR060366_CGC14 | CGCFAM_08777 | Yes | 4 | 1 | |
| CGMR060366_CGC8 | CGCFAM_08778 | Yes | 7 | 3 |
Top CAZyme Families