Cluster: CGMR060366_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR060366
- CGC Family ID: CGCFAM_00230
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5714 | k141_5714_42 | 43172 | 43657 | + | 4.A.1.1.12 |
| TF | k141_5714 | k141_5714_43 | 43705 | 44469 | + | HTH_6 |
| NULL(UNKNOWN) | k141_5714 | k141_5714_44 | 44545 | 44745 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_5714 | k141_5714_45 | 44961 | 46565 | + | 4.A.1.1.3 |
| CAZyme | k141_5714 | k141_5714_46 | 46577 | 47962 | + | GH4 |
Gene ID: k141_5714_42
Type: TC
Location: 43172 - 43657 (+)
Type: TC
Location: 43172 - 43657 (+)
Gene ID: k141_5714_43
Type: TF
Location: 43705 - 44469 (+)
Type: TF
Location: 43705 - 44469 (+)
Gene ID: k141_5714_44
Type:
Location: 44545 - 44745 (+)
Type:
Location: 44545 - 44745 (+)
Gene ID: k141_5714_45
Type: TC
Location: 44961 - 46565 (+)
Type: TC
Location: 44961 - 46565 (+)
Gene ID: k141_5714_46
Type: CAZyme
Location: 46577 - 47962 (+)
Type: CAZyme
Location: 46577 - 47962 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.