Cluster: PUL0196_CGMR060366_C0
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: CGMR060366
- CGC Family ID: CGCFAM_00243
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | PUL0196_CGMR060366_C0 | k141_2434_4 | 3802 | 4182 | - | 4.A.6.1.18 |
| TC | PUL0196_CGMR060366_C0 | k141_2434_5 | 4324 | 5145 | - | 4.A.6.1.18 |
| TC | PUL0196_CGMR060366_C0 | k141_2434_6 | 5132 | 5875 | - | 4.A.6.1.18 |
| TC | PUL0196_CGMR060366_C0 | k141_2434_7 | 6055 | 6537 | - | 4.A.6.1.18 |
| CAZyme | PUL0196_CGMR060366_C0 | k141_2434_8 | 6608 | 8389 | - | GH35 |
| CAZyme | PUL0196_CGMR060366_C0 | k141_2434_9 | 8656 | 9816 | - | CE9 |
| STP | PUL0196_CGMR060366_C0 | k141_2434_10 | 9893 | 11074 | - | SIS | SIS |
| TF | PUL0196_CGMR060366_C0 | k141_2434_11 | 11088 | 11804 | - | GntR |
| pfam | PUL0196_CGMR060366_C0 | k141_2434_12 | 12197 | 13168 | - | PMI_typeI_cat | MPI_cupin_dom |
Gene ID: k141_2434_4
Type: TC
Location: 3802 - 4182 (-)
Type: TC
Location: 3802 - 4182 (-)
Gene ID: k141_2434_5
Type: TC
Location: 4324 - 5145 (-)
Type: TC
Location: 4324 - 5145 (-)
Gene ID: k141_2434_6
Type: TC
Location: 5132 - 5875 (-)
Type: TC
Location: 5132 - 5875 (-)
Gene ID: k141_2434_7
Type: TC
Location: 6055 - 6537 (-)
Type: TC
Location: 6055 - 6537 (-)
Gene ID: k141_2434_8
Type: CAZyme
Location: 6608 - 8389 (-)
Type: CAZyme
Location: 6608 - 8389 (-)
Gene ID: k141_2434_9
Type: CAZyme
Location: 8656 - 9816 (-)
Type: CAZyme
Location: 8656 - 9816 (-)
Gene ID: k141_2434_10
Type: STP
Location: 9893 - 11074 (-)
Type: STP
Location: 9893 - 11074 (-)
Gene ID: k141_2434_11
Type: TF
Location: 11088 - 11804 (-)
Type: TF
Location: 11088 - 11804 (-)
Gene ID: k141_2434_12
Type: pfam
Location: 12197 - 13168 (-)
Type: pfam
Location: 12197 - 13168 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Gene Composition
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