Cluster: CGMR060366_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR060366
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_20481 | k141_20481_7 | 5031 | 5345 | + | 4.A.3.2.4 |
| TC | k141_20481 | k141_20481_8 | 5355 | 5678 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | k141_20481 | k141_20481_9 | 5698 | 6192 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_20481 | k141_20481_10 | 6215 | 7579 | + | 4.A.3.2.8 |
| CAZyme | k141_20481 | k141_20481_11 | 7625 | 9061 | + | GH1 |
Gene ID: k141_20481_7
Type: TC
Location: 5031 - 5345 (+)
Type: TC
Location: 5031 - 5345 (+)
Gene ID: k141_20481_8
Type: TC
Location: 5355 - 5678 (+)
Type: TC
Location: 5355 - 5678 (+)
Gene ID: k141_20481_9
Type:
Location: 5698 - 6192 (+)
Type:
Location: 5698 - 6192 (+)
Gene ID: k141_20481_10
Type: TC
Location: 6215 - 7579 (+)
Type: TC
Location: 6215 - 7579 (+)
Gene ID: k141_20481_11
Type: CAZyme
Location: 7625 - 9061 (+)
Type: CAZyme
Location: 7625 - 9061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus rhamnosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.