Genome Details
Selected Rep_genome_ID: CGMR001700
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus vaginalis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR001700 | 1,757,129 | 98.52% | 1.1% | China | Asia | CGMR |
| CGMR030302 | 1,803,242 | 98.46% | 1.55% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR001700_CGC11 | CGCFAM_00003 | Yes | 12 | 6 | |
| CGMR001700_CGC17 | CGCFAM_00176 | Yes | 8 | 1 | beta-glucan |
| CGMR001700_CGC20 | CGCFAM_00438 | Yes | 8 | 2 | |
| CGMR001700_CGC3 | CGCFAM_00486 | Yes | 8 | 1 | |
| CGMR001700_CGC12 | CGCFAM_00718 | Yes | 12 | 3 | |
| CGMR001700_CGC6 | CGCFAM_01048 | Yes | 3 | 1 | |
| CGMR001700_CGC8 | CGCFAM_02753 | Yes | 4 | 1 | |
| CGMR001700_CGC19 | CGCFAM_03422 | Yes | 4 | 1 | |
| CGMR001700_CGC9 | CGCFAM_03687 | Yes | 5 | 2 | |
| CGMR001700_CGC16 | CGCFAM_08089 | Yes | 6 | 1 | |
| CGMR001700_CGC2 | CGCFAM_08090 | Yes | 8 | 1 |
Top CAZyme Families