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Cluster: CGMR001700_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_18199 k141_18199_3 2966 4717 - GT4
TC k141_18199 k141_18199_4 4742 5962 - 3.A.1.103.5
pfam k141_18199 k141_18199_5 5962 6768 - ABC2_membrane
CAZyme k141_18199 k141_18199_6 6771 7706 - GT2
CAZyme k141_18199 k141_18199_7 7703 8851 - GT4
pfam k141_18199 k141_18199_8 8959 9810 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme k141_18199 k141_18199_9 9895 10821 - GT2
pfam k141_18199 k141_18199_10 10831 12975 - DUF7654 | DUF7657
CAZyme k141_18199 k141_18199_11 13023 14024 - GT2
NULL(UNKNOWN) k141_18199 k141_18199_12 14027 15295 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_18199 k141_18199_13 15279 15620 - DUF2304
CAZyme k141_18199 k141_18199_14 15628 16323 - GT2
Gene ID: k141_18199_3
Type: CAZyme
Location: 2966 - 4717 (-)
Gene ID: k141_18199_4
Type: TC
Location: 4742 - 5962 (-)
Gene ID: k141_18199_5
Type: pfam
Location: 5962 - 6768 (-)
Gene ID: k141_18199_6
Type: CAZyme
Location: 6771 - 7706 (-)
Gene ID: k141_18199_7
Type: CAZyme
Location: 7703 - 8851 (-)
Gene ID: k141_18199_8
Type: pfam
Location: 8959 - 9810 (-)
Gene ID: k141_18199_9
Type: CAZyme
Location: 9895 - 10821 (-)
Gene ID: k141_18199_10
Type: pfam
Location: 10831 - 12975 (-)
Gene ID: k141_18199_11
Type: CAZyme
Location: 13023 - 14024 (-)
Gene ID: k141_18199_12
Type:
Location: 14027 - 15295 (-)
Gene ID: k141_18199_13
Type: pfam
Location: 15279 - 15620 (-)
Gene ID: k141_18199_14
Type: CAZyme
Location: 15628 - 16323 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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