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Cluster: CGMR001700_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_12935 k141_12935_25 28715 30151 + GH1
NULL(UNKNOWN) k141_12935 k141_12935_26 30164 30406 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_12935 k141_12935_27 30641 30880 + 2.A.123.2.3
pfam k141_12935 k141_12935_28 30999 31313 + PTS_IIB
TF k141_12935 k141_12935_29 31369 33360 + HTH_11 | Mga
TC k141_12935 k141_12935_30 33373 33690 + 4.A.3.2.2
NULL(UNKNOWN) k141_12935 k141_12935_31 33713 34219 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_12935 k141_12935_32 34259 35602 + 4.A.3.2.8
Gene ID: k141_12935_25
Type: CAZyme
Location: 28715 - 30151 (+)
Gene ID: k141_12935_26
Type:
Location: 30164 - 30406 (+)
Gene ID: k141_12935_27
Type: TC
Location: 30641 - 30880 (+)
Gene ID: k141_12935_28
Type: pfam
Location: 30999 - 31313 (+)
Gene ID: k141_12935_29
Type: TF
Location: 31369 - 33360 (+)
Gene ID: k141_12935_30
Type: TC
Location: 33373 - 33690 (+)
Gene ID: k141_12935_31
Type:
Location: 33713 - 34219 (+)
Gene ID: k141_12935_32
Type: TC
Location: 34259 - 35602 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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