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Cluster: CGMR001700_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18199 k141_18199_38 37407 38813 - 3.A.2.1.5
TC k141_18199 k141_18199_39 38848 39726 - 3.A.2.1.5
TC k141_18199 k141_18199_40 39742 41247 - 3.A.2.1.2
pfam k141_18199 k141_18199_41 41263 41799 - OSCP
pfam k141_18199 k141_18199_42 41799 42293 - ATP-synt_B | Mt_ATP-synt_B
TC k141_18199 k141_18199_43 42308 43021 - 3.A.2.1.2
pfam k141_18199 k141_18199_44 43061 43261 - ATP-synt_C
CAZyme k141_18199 k141_18199_45 43592 45991 - GT35
CAZyme k141_18199 k141_18199_46 46013 47446 - GT5
pfam k141_18199 k141_18199_47 47443 48582 - NTP_transferase | Hexapep_GlmU
pfam k141_18199 k141_18199_48 48572 49714 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_18199 k141_18199_49 49718 51628 - CBM48 | GH13_9
Gene ID: k141_18199_38
Type: TC
Location: 37407 - 38813 (-)
Gene ID: k141_18199_39
Type: TC
Location: 38848 - 39726 (-)
Gene ID: k141_18199_40
Type: TC
Location: 39742 - 41247 (-)
Gene ID: k141_18199_41
Type: pfam
Location: 41263 - 41799 (-)
Gene ID: k141_18199_42
Type: pfam
Location: 41799 - 42293 (-)
Gene ID: k141_18199_43
Type: TC
Location: 42308 - 43021 (-)
Gene ID: k141_18199_44
Type: pfam
Location: 43061 - 43261 (-)
Gene ID: k141_18199_45
Type: CAZyme
Location: 43592 - 45991 (-)
Gene ID: k141_18199_46
Type: CAZyme
Location: 46013 - 47446 (-)
Gene ID: k141_18199_47
Type: pfam
Location: 47443 - 48582 (-)
Gene ID: k141_18199_48
Type: pfam
Location: 48572 - 49714 (-)
Gene ID: k141_18199_49
Type: CAZyme
Location: 49718 - 51628 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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