Cluster: CGMR001700_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001700
- CGC Family ID: CGCFAM_08090
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_31493 | k141_31493_4 | 1886 | 4105 | - | GT51 |
| pfam | k141_31493 | k141_31493_5 | 4243 | 5103 | + | PseudoU_synth_2 |
| STP | k141_31493 | k141_31493_6 | 5441 | 5650 | - | HMA |
| TC | k141_31493 | k141_31493_7 | 5663 | 7915 | - | 3.A.3.5.15 |
| TF | k141_31493 | k141_31493_8 | 7919 | 8386 | - | Pencillinase_R |
| TC | k141_31493 | k141_31493_9 | 8530 | 10032 | - | 3.A.1.15.3 |
| TC | k141_31493 | k141_31493_10 | 10042 | 10848 | - | 3.A.1.15.3 |
| TC | k141_31493 | k141_31493_11 | 10841 | 11545 | - | 3.A.1.15.3 |
Gene ID: k141_31493_4
Type: CAZyme
Location: 1886 - 4105 (-)
Type: CAZyme
Location: 1886 - 4105 (-)
Gene ID: k141_31493_5
Type: pfam
Location: 4243 - 5103 (+)
Type: pfam
Location: 4243 - 5103 (+)
Gene ID: k141_31493_6
Type: STP
Location: 5441 - 5650 (-)
Type: STP
Location: 5441 - 5650 (-)
Gene ID: k141_31493_7
Type: TC
Location: 5663 - 7915 (-)
Type: TC
Location: 5663 - 7915 (-)
Gene ID: k141_31493_8
Type: TF
Location: 7919 - 8386 (-)
Type: TF
Location: 7919 - 8386 (-)
Gene ID: k141_31493_9
Type: TC
Location: 8530 - 10032 (-)
Type: TC
Location: 8530 - 10032 (-)
Gene ID: k141_31493_10
Type: TC
Location: 10042 - 10848 (-)
Type: TC
Location: 10042 - 10848 (-)
Gene ID: k141_31493_11
Type: TC
Location: 10841 - 11545 (-)
Type: TC
Location: 10841 - 11545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.