Cluster: CGMR001700_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR001700
- CGC Family ID: CGCFAM_08089
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1119 | k141_1119_8 | 7879 | 10062 | + | 3.A.1.3.25 |
| TC | k141_1119 | k141_1119_9 | 10062 | 10802 | + | 3.A.1.3.25 |
| TC | k141_1119 | k141_1119_10 | 11224 | 12759 | + | 3.A.1.121.3 |
| TC | k141_1119 | k141_1119_11 | 12780 | 14528 | - | 3.A.1.135.5 |
| TC | k141_1119 | k141_1119_12 | 14509 | 16254 | - | 3.A.1.135.5 |
| CAZyme | k141_1119 | k141_1119_13 | 16437 | 17144 | - | GH73 |
Gene ID: k141_1119_8
Type: TC
Location: 7879 - 10062 (+)
Type: TC
Location: 7879 - 10062 (+)
Gene ID: k141_1119_9
Type: TC
Location: 10062 - 10802 (+)
Type: TC
Location: 10062 - 10802 (+)
Gene ID: k141_1119_10
Type: TC
Location: 11224 - 12759 (+)
Type: TC
Location: 11224 - 12759 (+)
Gene ID: k141_1119_11
Type: TC
Location: 12780 - 14528 (-)
Type: TC
Location: 12780 - 14528 (-)
Gene ID: k141_1119_12
Type: TC
Location: 14509 - 16254 (-)
Type: TC
Location: 14509 - 16254 (-)
Gene ID: k141_1119_13
Type: CAZyme
Location: 16437 - 17144 (-)
Type: CAZyme
Location: 16437 - 17144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.