Genome Details
Selected Rep_genome_ID: C137.bin_11
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma merdipullorum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C137.bin_11 | 3,396,321 | 99.19% | 0.27% | China(Inner Mongolia) | Asia | IMGG |
| CGMR068304 | 3,124,186 | 98.39% | 0.27% | China | Asia | CGMR |
| HRGMv2_0710 | 3,239,922 | 99.19% | 0.268% | South Korea | Asia | HRGM |
| Rep_3030 | 3,247,365 | 98.7903% | 0.268817% | NA | NA | WIS |
| SPMP102_bin.53 | 2,937,999 | 92.72% | 1.28% | Singapore | Asia | SPMP |
| SW098_bin.48 | 2,774,379 | 96.1% | 0.87% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C137.bin_11_CGC36 | CGCFAM_00004 | Yes | 7 | 3 | alpha-glucan |
| C137.bin_11_CGC35 | CGCFAM_00021 | Yes | 4 | 1 | |
| C137.bin_11_CGC38 | CGCFAM_00026 | Yes | 7 | 2 | |
| C137.bin_11_CGC8 | CGCFAM_00047 | Yes | 6 | 2 | |
| C137.bin_11_CGC40 | CGCFAM_00073 | Yes | 10 | 6 | |
| C137.bin_11_CGC29 | CGCFAM_00167 | Yes | 7 | 3 | |
| C137.bin_11_CGC25 | CGCFAM_00351 | Yes | 4 | 1 | |
| C137.bin_11_CGC30 | CGCFAM_00366 | Yes | 4 | 1 | |
| C137.bin_11_CGC41 | CGCFAM_00746 | Yes | 7 | 3 | |
| C137.bin_11_CGC28 | CGCFAM_01139 | Yes | 12 | 4 | |
| C137.bin_11_CGC20 | CGCFAM_01237 | Yes | 5 | 2 | |
| C137.bin_11_CGC21 | CGCFAM_01237 | Yes | 4 | 1 | |
| C137.bin_11_CGC43 | CGCFAM_01518 | Yes | 4 | 1 | |
| C137.bin_11_CGC1 | CGCFAM_02455 | Yes | 7 | 1 | |
| C137.bin_11_CGC33 | CGCFAM_02720 | Yes | 4 | 2 | |
| C137.bin_11_CGC15 | CGCFAM_03031 | Yes | 4 | 1 | |
| C137.bin_11_CGC37 | CGCFAM_03219 | Yes | 4 | 1 | |
| C137.bin_11_CGC22 | CGCFAM_04602 | Yes | 6 | 1 | |
| C137.bin_11_CGC10 | CGCFAM_04603 | Yes | 8 | 1 | |
| C137.bin_11_CGC31 | CGCFAM_04604 | Yes | 12 | 1 | |
| C137.bin_11_CGC14 | CGCFAM_07918 | Yes | 3 | 1 |
Top CAZyme Families