Cluster: C137.bin_11_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_11
- CGC Family ID: CGCFAM_04603
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_1610 | C137_contig_1610_494 | 542626 | 543696 | + | GT28 |
| TC | C137_contig_1610 | C137_contig_1610_495 | 543772 | 544614 | - | 3.A.1.1.45 |
| TC | C137_contig_1610 | C137_contig_1610_496 | 544614 | 545531 | - | 3.A.1.1.45 |
| TC | C137_contig_1610 | C137_contig_1610_497 | 545626 | 546903 | - | 3.A.1.1.45 |
| TC | C137_contig_1610 | C137_contig_1610_498 | 547201 | 548571 | + | 3.A.1.1.45 |
| TC | C137_contig_1610 | C137_contig_1610_499 | 548617 | 549465 | + | 3.A.1.1.45 |
| TC | C137_contig_1610 | C137_contig_1610_500 | 549467 | 550315 | + | 3.A.1.1.45 |
| TC | C137_contig_1610 | C137_contig_1610_501 | 550318 | 551340 | - | 2.A.98.1.4 |
Gene ID: C137_contig_1610_494
Type: CAZyme
Location: 542626 - 543696 (+)
Type: CAZyme
Location: 542626 - 543696 (+)
Gene ID: C137_contig_1610_495
Type: TC
Location: 543772 - 544614 (-)
Type: TC
Location: 543772 - 544614 (-)
Gene ID: C137_contig_1610_496
Type: TC
Location: 544614 - 545531 (-)
Type: TC
Location: 544614 - 545531 (-)
Gene ID: C137_contig_1610_497
Type: TC
Location: 545626 - 546903 (-)
Type: TC
Location: 545626 - 546903 (-)
Gene ID: C137_contig_1610_498
Type: TC
Location: 547201 - 548571 (+)
Type: TC
Location: 547201 - 548571 (+)
Gene ID: C137_contig_1610_499
Type: TC
Location: 548617 - 549465 (+)
Type: TC
Location: 548617 - 549465 (+)
Gene ID: C137_contig_1610_500
Type: TC
Location: 549467 - 550315 (+)
Type: TC
Location: 549467 - 550315 (+)
Gene ID: C137_contig_1610_501
Type: TC
Location: 550318 - 551340 (-)
Type: TC
Location: 550318 - 551340 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C137_contig_1610_495 | vegetarian > vegan | 1.09739 | 0.00701 |
| C137_contig_1610_501 | vegetarian > vegan | 1.10876 | 0.00701 |