Cluster: C137.bin_11_CGC31
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: C137.bin_11
- CGC Family ID: CGCFAM_04604
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_54 | 61278 | 62324 | + | 3.A.1.14.21 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_55 | 62312 | 63106 | + | 3.A.1.14.12 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_56 | 63385 | 63858 | + | 3.D.1.5.1 |
| STP | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_57 | 63866 | 64414 | + | HATPase_c |
| NULL(UNKNOWN) | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_58 | 64418 | 64792 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_59 | 64819 | 66609 | + | 3.D.1.5.1 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_60 | 66633 | 68378 | + | 3.D.1.5.1 |
| pfam | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_61 | 68677 | 69525 | + | MMR_HSR1 | FeoB_N |
| pfam | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_62 | 69509 | 70150 | + | RNase_HII |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_63 | 70147 | 74241 | + | GT39 |
| peptidase | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_64 | 74273 | 75805 | + | S16.UNW |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_65 | 75809 | 76897 | + | 3.A.11.1.3 |
Gene ID: C137_contig_729_corr_4_s1_np12_54
Type: TC
Location: 61278 - 62324 (+)
Type: TC
Location: 61278 - 62324 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_55
Type: TC
Location: 62312 - 63106 (+)
Type: TC
Location: 62312 - 63106 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_56
Type: TC
Location: 63385 - 63858 (+)
Type: TC
Location: 63385 - 63858 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_57
Type: STP
Location: 63866 - 64414 (+)
Type: STP
Location: 63866 - 64414 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_58
Type:
Location: 64418 - 64792 (+)
Type:
Location: 64418 - 64792 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_59
Type: TC
Location: 64819 - 66609 (+)
Type: TC
Location: 64819 - 66609 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_60
Type: TC
Location: 66633 - 68378 (+)
Type: TC
Location: 66633 - 68378 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_61
Type: pfam
Location: 68677 - 69525 (+)
Type: pfam
Location: 68677 - 69525 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_62
Type: pfam
Location: 69509 - 70150 (+)
Type: pfam
Location: 69509 - 70150 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_63
Type: CAZyme
Location: 70147 - 74241 (+)
Type: CAZyme
Location: 70147 - 74241 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_64
Type: peptidase
Location: 74273 - 75805 (+)
Type: peptidase
Location: 74273 - 75805 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_65
Type: TC
Location: 75809 - 76897 (+)
Type: TC
Location: 75809 - 76897 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.