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Cluster: C137.bin_11_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C137_contig_1610 C137_contig_1610_31 27969 29309 - 2.A.39.1.1
pfam C137_contig_1610 C137_contig_1610_32 29468 31057 - PucR | HTH_30
TF C137_contig_1610 C137_contig_1610_33 31319 32341 + LacI
CAZyme C137_contig_1610 C137_contig_1610_34 32543 34234 + GH66
TC C137_contig_1610 C137_contig_1610_35 34271 35473 + 3.A.1.1.33
TC C137_contig_1610 C137_contig_1610_36 35563 36519 + 3.A.1.1.34
TC C137_contig_1610 C137_contig_1610_37 36516 37361 + 3.A.1.1.36
Gene ID: C137_contig_1610_31
Type: TC
Location: 27969 - 29309 (-)
Gene ID: C137_contig_1610_32
Type: pfam
Location: 29468 - 31057 (-)
Gene ID: C137_contig_1610_33
Type: TF
Location: 31319 - 32341 (+)
Gene ID: C137_contig_1610_34
Type: CAZyme
Location: 32543 - 34234 (+)
Gene ID: C137_contig_1610_35
Type: TC
Location: 34271 - 35473 (+)
Gene ID: C137_contig_1610_36
Type: TC
Location: 35563 - 36519 (+)
Gene ID: C137_contig_1610_37
Type: TC
Location: 36516 - 37361 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C137_contig_1610_35 vegetarian > vegan 1.75566 0.00701
C137_contig_1610_36 vegetarian > vegan 2.80080 0.00701
C137_contig_1610_37 vegetarian > vegan 1.69916 0.00701

🧭 Explore Read Mapping of CGC

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