Cluster: C137.bin_11_CGC40
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: C137.bin_11
- CGC Family ID: CGCFAM_00073
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_762 | 842170 | 843588 | + | 9.B.18.1.1 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_763 | 843585 | 844157 | + | GT2 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_764 | 844240 | 845283 | + | GT4 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_765 | 845295 | 846092 | + | GT2 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_766 | 846112 | 846906 | + | 3.A.1.103.6 |
| TC | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_767 | 846923 | 847651 | + | 3.A.1.103.5 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_768 | 847663 | 849951 | + | GT4 | GT4 |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_769 | 849914 | 852268 | + | GT4 | GT4 |
| NULL(UNKNOWN) | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_770 | 852258 | 854822 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | C137_contig_729_corr_4_s1_np12 | C137_contig_729_corr_4_s1_np12_771 | 854782 | 855741 | + | GT2 |
Gene ID: C137_contig_729_corr_4_s1_np12_762
Type: TC
Location: 842170 - 843588 (+)
Type: TC
Location: 842170 - 843588 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_763
Type: CAZyme
Location: 843585 - 844157 (+)
Type: CAZyme
Location: 843585 - 844157 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_764
Type: CAZyme
Location: 844240 - 845283 (+)
Type: CAZyme
Location: 844240 - 845283 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_765
Type: CAZyme
Location: 845295 - 846092 (+)
Type: CAZyme
Location: 845295 - 846092 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_766
Type: TC
Location: 846112 - 846906 (+)
Type: TC
Location: 846112 - 846906 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_767
Type: TC
Location: 846923 - 847651 (+)
Type: TC
Location: 846923 - 847651 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_768
Type: CAZyme
Location: 847663 - 849951 (+)
Type: CAZyme
Location: 847663 - 849951 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_769
Type: CAZyme
Location: 849914 - 852268 (+)
Type: CAZyme
Location: 849914 - 852268 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_770
Type:
Location: 852258 - 854822 (+)
Type:
Location: 852258 - 854822 (+)
Gene ID: C137_contig_729_corr_4_s1_np12_771
Type: CAZyme
Location: 854782 - 855741 (+)
Type: CAZyme
Location: 854782 - 855741 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.