Cluster: C137.bin_11_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: C137.bin_11
- CGC Family ID: CGCFAM_01237
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C137_contig_729_corr_4_s0_np12 | C137_contig_729_corr_4_s0_np12_26 | 27782 | 29512 | + | GH129 |
| CAZyme | C137_contig_729_corr_4_s0_np12 | C137_contig_729_corr_4_s0_np12_27 | 29535 | 30869 | + | GH43_33 |
| STP | C137_contig_729_corr_4_s0_np12 | C137_contig_729_corr_4_s0_np12_28 | 30938 | 32221 | + | SBP_bac_1 |
| TC | C137_contig_729_corr_4_s0_np12 | C137_contig_729_corr_4_s0_np12_29 | 32301 | 33170 | + | 3.A.1.1.7 |
| TC | C137_contig_729_corr_4_s0_np12 | C137_contig_729_corr_4_s0_np12_30 | 33170 | 34009 | + | 3.A.1.1.34 |
Gene ID: C137_contig_729_corr_4_s0_np12_26
Type: CAZyme
Location: 27782 - 29512 (+)
Type: CAZyme
Location: 27782 - 29512 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_27
Type: CAZyme
Location: 29535 - 30869 (+)
Type: CAZyme
Location: 29535 - 30869 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_28
Type: STP
Location: 30938 - 32221 (+)
Type: STP
Location: 30938 - 32221 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_29
Type: TC
Location: 32301 - 33170 (+)
Type: TC
Location: 32301 - 33170 (+)
Gene ID: C137_contig_729_corr_4_s0_np12_30
Type: TC
Location: 33170 - 34009 (+)
Type: TC
Location: 33170 - 34009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.