Genome Details
Selected Rep_genome_ID: C129.CMAG_1
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_L
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C129.CMAG_1 | 1,947,882 | 99.89% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR013731 | 1,955,210 | 99.7% | 0.14% | China | Asia | CGMR |
| MGYG000001088 | 1,866,538 | 99.89% | 0% | Sweden | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C129.CMAG_1_CGC8 | CGCFAM_00382 | Yes | 6 | 3 | |
| C129.CMAG_1_CGC21 | CGCFAM_00702 | Yes | 15 | 3 | |
| C129.CMAG_1_CGC5 | CGCFAM_01193 | Yes | 7 | 2 | |
| C129.CMAG_1_CGC4 | CGCFAM_01408 | Yes | 8 | 2 | |
| C129.CMAG_1_CGC7 | CGCFAM_01420 | Yes | 4 | 1 | |
| C129.CMAG_1_CGC6 | CGCFAM_03482 | Yes | 10 | 1 | |
| C129.CMAG_1_CGC2 | CGCFAM_05006 | Yes | 3 | 1 |
Top CAZyme Families