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Cluster: C129.CMAG_1_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C129_contig_2368 C129_contig_2368_1591 1723163 1725418 - 1.B.14.1.3
TC C129_contig_2368 C129_contig_2368_1592 1725661 1726368 + 2.A.88.8.6
TC C129_contig_2368 C129_contig_2368_1593 1726383 1727699 + 2.A.1.15.11
peptidase C129_contig_2368 C129_contig_2368_1594 1727922 1728749 + C44.UPW
STP C129_contig_2368 C129_contig_2368_1595 1728817 1730187 - Pyr_redox_2
CAZyme C129_contig_2368 C129_contig_2368_1596 1730406 1731533 + GT2
CAZyme C129_contig_2368 C129_contig_2368_1597 1731567 1732541 + GT2
CAZyme C129_contig_2368 C129_contig_2368_1598 1732563 1733399 - GT8
TC C129_contig_2368 C129_contig_2368_1599 1733555 1739038 - 1.B.40.1.5
pfam C129_contig_2368 C129_contig_2368_1600 1739435 1739854 + 4HBT
pfam C129_contig_2368 C129_contig_2368_1601 1739851 1740822 + Ferrochelatase
TC C129_contig_2368 C129_contig_2368_1602 1741040 1742083 - 1.B.1.3.1
pfam C129_contig_2368 C129_contig_2368_1603 1742396 1743379 - tRNA-synt_2
TC C129_contig_2368 C129_contig_2368_1604 1743660 1745459 + 3.D.10.1.4
TC C129_contig_2368 C129_contig_2368_1605 1745452 1746222 + 3.D.10.1.4
Gene ID: C129_contig_2368_1591
Type: TC
Location: 1723163 - 1725418 (-)
Gene ID: C129_contig_2368_1592
Type: TC
Location: 1725661 - 1726368 (+)
Gene ID: C129_contig_2368_1593
Type: TC
Location: 1726383 - 1727699 (+)
Gene ID: C129_contig_2368_1594
Type: peptidase
Location: 1727922 - 1728749 (+)
Gene ID: C129_contig_2368_1595
Type: STP
Location: 1728817 - 1730187 (-)
Gene ID: C129_contig_2368_1596
Type: CAZyme
Location: 1730406 - 1731533 (+)
Gene ID: C129_contig_2368_1597
Type: CAZyme
Location: 1731567 - 1732541 (+)
Gene ID: C129_contig_2368_1598
Type: CAZyme
Location: 1732563 - 1733399 (-)
Gene ID: C129_contig_2368_1599
Type: TC
Location: 1733555 - 1739038 (-)
Gene ID: C129_contig_2368_1600
Type: pfam
Location: 1739435 - 1739854 (+)
Gene ID: C129_contig_2368_1601
Type: pfam
Location: 1739851 - 1740822 (+)
Gene ID: C129_contig_2368_1602
Type: TC
Location: 1741040 - 1742083 (-)
Gene ID: C129_contig_2368_1603
Type: pfam
Location: 1742396 - 1743379 (-)
Gene ID: C129_contig_2368_1604
Type: TC
Location: 1743660 - 1745459 (+)
Gene ID: C129_contig_2368_1605
Type: TC
Location: 1745452 - 1746222 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C129_contig_2368_1594 vegan > omnivore 1.94120 0.00918
C129_contig_2368_1594 vegetarian > omnivore 1.27441 0.01522
C129_contig_2368_1602 vegetarian > vegan 1.10104 0.04592
C129_contig_2368_1603 vegetarian > omnivore 1.09805 0.01522
C129_contig_2368_1604 vegan > omnivore 1.09030 0.00918

🧭 Explore Read Mapping of CGC

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