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Cluster: C129.CMAG_1_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC C129_contig_2368 C129_contig_2368_301 305546 306544 + 3.A.1.2.4
TC C129_contig_2368 C129_contig_2368_302 306599 308110 + 3.A.1.2.4
TC C129_contig_2368 C129_contig_2368_303 308114 309241 + 3.A.1.2.4
TF C129_contig_2368 C129_contig_2368_304 309353 310516 + HTH_AraC | HTH_AraC
CAZyme C129_contig_2368 C129_contig_2368_305 310568 311611 + GT9
TC C129_contig_2368 C129_contig_2368_306 311608 312513 + 2.A.7.3.58
CAZyme C129_contig_2368 C129_contig_2368_307 312510 313463 + GT9
TC C129_contig_2368 C129_contig_2368_308 313629 314708 + 1.B.1.3.3
Gene ID: C129_contig_2368_301
Type: TC
Location: 305546 - 306544 (+)
Gene ID: C129_contig_2368_302
Type: TC
Location: 306599 - 308110 (+)
Gene ID: C129_contig_2368_303
Type: TC
Location: 308114 - 309241 (+)
Gene ID: C129_contig_2368_304
Type: TF
Location: 309353 - 310516 (+)
Gene ID: C129_contig_2368_305
Type: CAZyme
Location: 310568 - 311611 (+)
Gene ID: C129_contig_2368_306
Type: TC
Location: 311608 - 312513 (+)
Gene ID: C129_contig_2368_307
Type: CAZyme
Location: 312510 - 313463 (+)
Gene ID: C129_contig_2368_308
Type: TC
Location: 313629 - 314708 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
C129_contig_2368_308 vegetarian > omnivore 1.31226 0.01522

🧭 Explore Read Mapping of CGC

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