Cluster: C129.CMAG_1_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: C129.CMAG_1
- CGC Family ID: CGCFAM_00382
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C129_contig_2368 | C129_contig_2368_405 | 423830 | 424630 | + | GT111 |
| pfam | C129_contig_2368 | C129_contig_2368_406 | 424634 | 425446 | + | LicD |
| CAZyme | C129_contig_2368 | C129_contig_2368_407 | 425439 | 426494 | + | GT2 |
| CAZyme | C129_contig_2368 | C129_contig_2368_408 | 426510 | 427508 | + | GT2 |
| NULL(UNKNOWN) | C129_contig_2368 | C129_contig_2368_409 | 427517 | 428692 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C129_contig_2368 | C129_contig_2368_410 | 428689 | 430134 | + | 2.A.66.2.16 |
Gene ID: C129_contig_2368_405
Type: CAZyme
Location: 423830 - 424630 (+)
Type: CAZyme
Location: 423830 - 424630 (+)
Gene ID: C129_contig_2368_406
Type: pfam
Location: 424634 - 425446 (+)
Type: pfam
Location: 424634 - 425446 (+)
Gene ID: C129_contig_2368_407
Type: CAZyme
Location: 425439 - 426494 (+)
Type: CAZyme
Location: 425439 - 426494 (+)
Gene ID: C129_contig_2368_408
Type: CAZyme
Location: 426510 - 427508 (+)
Type: CAZyme
Location: 426510 - 427508 (+)
Gene ID: C129_contig_2368_409
Type:
Location: 427517 - 428692 (+)
Type:
Location: 427517 - 428692 (+)
Gene ID: C129_contig_2368_410
Type: TC
Location: 428689 - 430134 (+)
Type: TC
Location: 428689 - 430134 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_L
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.