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Genome Details

Selected Rep_genome_ID: AG400_49
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides gordonii
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG400_49 6,542,195 99.62% 0.9% NA Africa H3AfricaPhase2
CGMR016059 5,790,856 96.54% 0.38% China Asia CGMR
CGMR052860 5,632,758 93.3% 3.08% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
AG400_49_CGC85 CGCFAM_00109 Yes 9 4 host glycan
AG400_49_CGC95 CGCFAM_00110 Yes 13 5 pectin/host glycan
AG400_49_CGC61 CGCFAM_00150 Yes 5 1
AG400_49_CGC5 CGCFAM_00151 Yes 7 4
AG400_49_CGC37 CGCFAM_00158 Yes 11 2
AG400_49_CGC111 CGCFAM_00170 Yes 9 4
AG400_49_CGC53 CGCFAM_00256 Yes 7 2
AG400_49_CGC115 CGCFAM_00274 Yes 13 4
AG400_49_CGC10 CGCFAM_00301 Yes 12 7
AG400_49_CGC119 CGCFAM_00301 Yes 13 7
AG400_49_CGC16 CGCFAM_00303 Yes 3 1
AG400_49_CGC98 CGCFAM_00304 Yes 4 1
AG400_49_CGC54 CGCFAM_00360 Yes 13 6 host glycan
AG400_49_CGC97 CGCFAM_00365 Yes 5 3 host glycan
AG400_49_CGC104 CGCFAM_00388 Yes 5 2
AG400_49_CGC12 CGCFAM_00404 Yes 8 2
AG400_49_CGC31 CGCFAM_00436 Yes 8 1
AG400_49_CGC99 CGCFAM_00512 Yes 6 1
AG400_49_CGC19 CGCFAM_00519 Yes 5 1
AG400_49_CGC92 CGCFAM_00724 Yes 3 1 xylan
AG400_49_CGC46 CGCFAM_00758 Yes 4 1
AG400_49_CGC30 CGCFAM_00759 Yes 6 2
AG400_49_CGC89 CGCFAM_00792 Yes 5 1
AG400_49_CGC14 CGCFAM_00840 Yes 4 2
AG400_49_CGC101 CGCFAM_00892 Yes 3 1
Top CAZyme Families