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Cluster: AG400_49_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_285286 k141_285286_19 26339 29644 + 1.B.14.6.1
TC k141_285286 k141_285286_20 29669 31204 + 8.A.46.1.4
pfam k141_285286 k141_285286_21 31452 32369 + DHDPS
pfam k141_285286 k141_285286_22 32376 33578 + GlcNAc_2-epim
TC k141_285286 k141_285286_23 33595 34866 + 2.A.1.14.14
CAZyme k141_285286 k141_285286_24 34983 36608 + CBM93 | GH33
CAZyme k141_285286 k141_285286_25 36611 38620 + GH20
CAZyme k141_285286 k141_285286_26 38636 41863 + CE20
TC k141_285286 k141_285286_27 42307 43935 - 8.A.46.2.2
TC k141_285286 k141_285286_28 43951 47151 - 1.B.14.6.2
CAZyme k141_285286 k141_285286_29 47601 50288 + GH3
CAZyme k141_285286 k141_285286_30 50294 52492 + GH163
CAZyme k141_285286 k141_285286_31 52518 54830 + GH20
Gene ID: k141_285286_19
Type: TC
Location: 26339 - 29644 (+)
Gene ID: k141_285286_20
Type: TC
Location: 29669 - 31204 (+)
Gene ID: k141_285286_21
Type: pfam
Location: 31452 - 32369 (+)
Gene ID: k141_285286_22
Type: pfam
Location: 32376 - 33578 (+)
Gene ID: k141_285286_23
Type: TC
Location: 33595 - 34866 (+)
Gene ID: k141_285286_24
Type: CAZyme
Location: 34983 - 36608 (+)
Gene ID: k141_285286_25
Type: CAZyme
Location: 36611 - 38620 (+)
Gene ID: k141_285286_26
Type: CAZyme
Location: 38636 - 41863 (+)
Gene ID: k141_285286_27
Type: TC
Location: 42307 - 43935 (-)
Gene ID: k141_285286_28
Type: TC
Location: 43951 - 47151 (-)
Gene ID: k141_285286_29
Type: CAZyme
Location: 47601 - 50288 (+)
Gene ID: k141_285286_30
Type: CAZyme
Location: 50294 - 52492 (+)
Gene ID: k141_285286_31
Type: CAZyme
Location: 52518 - 54830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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