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Cluster: AG400_49_CGC85

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16634 k141_16634_25 33306 36305 + 1.B.14.6.1
pfam k141_16634 k141_16634_26 36325 37896 + SusD_RagB | SusD-like_3
CAZyme k141_16634 k141_16634_27 37983 40772 + GH43_31
CAZyme k141_16634 k141_16634_28 40797 41753 + GH43_31
CAZyme k141_16634 k141_16634_29 41750 42760 + GH43_3
CAZyme k141_16634 k141_16634_30 42778 44808 + GH182
pfam k141_16634 k141_16634_31 45545 46339 + DUF6261
TC k141_16634 k141_16634_32 46367 47998 + 2.A.21.9.2
TC k141_16634 k141_16634_33 48194 49423 - 2.A.1.7.1
Gene ID: k141_16634_25
Type: TC
Location: 33306 - 36305 (+)
Gene ID: k141_16634_26
Type: pfam
Location: 36325 - 37896 (+)
Gene ID: k141_16634_27
Type: CAZyme
Location: 37983 - 40772 (+)
Gene ID: k141_16634_28
Type: CAZyme
Location: 40797 - 41753 (+)
Gene ID: k141_16634_29
Type: CAZyme
Location: 41750 - 42760 (+)
Gene ID: k141_16634_30
Type: CAZyme
Location: 42778 - 44808 (+)
Gene ID: k141_16634_31
Type: pfam
Location: 45545 - 46339 (+)
Gene ID: k141_16634_32
Type: TC
Location: 46367 - 47998 (+)
Gene ID: k141_16634_33
Type: TC
Location: 48194 - 49423 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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