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Cluster: AG400_49_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_104537 k141_104537_248 275820 277364 - 3.B.1.1.2
TF k141_104537 k141_104537_249 277739 278452 + GntR
TC k141_104537 k141_104537_250 278478 281069 + 2.A.21.3.7
pfam k141_104537 k141_104537_251 281074 281985 + DHDPS
TC k141_104537 k141_104537_252 282073 285237 + 1.B.14.6.1
pfam k141_104537 k141_104537_253 285275 286729 + SusD_RagB | SusD-like_3
CAZyme k141_104537 k141_104537_254 286874 288004 + GH33
CAZyme k141_104537 k141_104537_255 288213 289844 + GH33
Gene ID: k141_104537_248
Type: TC
Location: 275820 - 277364 (-)
Gene ID: k141_104537_249
Type: TF
Location: 277739 - 278452 (+)
Gene ID: k141_104537_250
Type: TC
Location: 278478 - 281069 (+)
Gene ID: k141_104537_251
Type: pfam
Location: 281074 - 281985 (+)
Gene ID: k141_104537_252
Type: TC
Location: 282073 - 285237 (+)
Gene ID: k141_104537_253
Type: pfam
Location: 285275 - 286729 (+)
Gene ID: k141_104537_254
Type: CAZyme
Location: 286874 - 288004 (+)
Gene ID: k141_104537_255
Type: CAZyme
Location: 288213 - 289844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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