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Cluster: AG400_49_CGC111

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_113746 k141_113746_85 103751 105790 + GH133
CAZyme k141_113746 k141_113746_86 105805 107073 + GT4
CAZyme k141_113746 k141_113746_87 107091 108392 + GH57
pfam k141_113746 k141_113746_88 108468 109838 - DUF4270
CAZyme k141_113746 k141_113746_89 109856 110725 - GT5
pfam k141_113746 k141_113746_90 110774 111616 + Pantoate_ligase
pfam k141_113746 k141_113746_91 111639 111989 + Asp_decarbox
TC k141_113746 k141_113746_92 112101 113423 + 2.A.66.1.28
TC k141_113746 k141_113746_93 113503 114828 + 3.A.5.1.1
Gene ID: k141_113746_85
Type: CAZyme
Location: 103751 - 105790 (+)
Gene ID: k141_113746_86
Type: CAZyme
Location: 105805 - 107073 (+)
Gene ID: k141_113746_87
Type: CAZyme
Location: 107091 - 108392 (+)
Gene ID: k141_113746_88
Type: pfam
Location: 108468 - 109838 (-)
Gene ID: k141_113746_89
Type: CAZyme
Location: 109856 - 110725 (-)
Gene ID: k141_113746_90
Type: pfam
Location: 110774 - 111616 (+)
Gene ID: k141_113746_91
Type: pfam
Location: 111639 - 111989 (+)
Gene ID: k141_113746_92
Type: TC
Location: 112101 - 113423 (+)
Gene ID: k141_113746_93
Type: TC
Location: 113503 - 114828 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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